PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009781921.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 223aa    MW: 24929.7 Da    PI: 6.9654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009781921.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.87.6e-15103153255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GV +++ +g + Ae rdp  +g  +r +lg++ tae+Aa a+++a+ k++g
  XP_009781921.1 103 RYIGVKRRP-WGTFSAEMRDPDRRG--ARLWLGTYETAEDAALAYDQAAFKIRG 153
                     699***9*9.**********95454..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-10103153IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-28103162IPR001471AP2/ERF domain
SMARTSM003803.4E-30103167IPR001471AP2/ERF domain
CDDcd000181.02E-26103163No hitNo description
PROSITE profilePS5103222.26103161IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-20103162IPR016177DNA-binding domain
PRINTSPR003678.3E-8104115IPR001471AP2/ERF domain
PRINTSPR003678.3E-8127143IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MNSADVTFSF SDFNLLESIK QHLLNDSDFS ETLSPMSSSN GLPNSPSSGF GSSLSAENSF  60
EISLSDQNFE ETIPNLEEKS ESEEEMKGNV VARENNAPED WRRYIGVKRR PWGTFSAEMR  120
DPDRRGARLW LGTYETAEDA ALAYDQAAFK IRGSRARLNF PHLIGSNMPK PARVTARRSR  180
TRSPEPLSSS STSSSVNVPR KRKIDVINSI AKVCHGWNLH MLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A3e-26102167469ATERF1
2gcc_A3e-26102167469ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ8591570.0GQ859157.1 Nicotiana benthamiana ERF1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009781921.11e-163PREDICTED: ethylene-responsive transcription factor 2-like
RefseqXP_016481012.11e-163PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404792e-38ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLD7P2321e-125D7P232_NICBE; ERF1
STRINGPGSC0003DMT4000971012e-79(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-23ethylene-responsive element binding factor 13